Python notebooks by topic:

Regression analysis of the US house price index (notebook)

Regression analysis of the NHANES blood pressure data (notebook)

Differential expression analysis of gene expression data (notebook)

Simulation study of FDR methods (notebook)

FDR and large scale inference (notebook

- Cross validation and ROC curves for predicting diabetes status (notebook)

- PCA of fertility rates by country (notebook)

L1 regularized logistic regression example with simulated data (notebook)

L1 regularized logistic regression with data from medical utilization studies (notebook)

L1 linear regression for a diabetes data set (notebook)

Logistic regression power analysis using simulation (notebook)

Relative risk logistic regression (notebook)

Regression graphics (notebook)

Gamma GLM (notebook)

Logistic regression analysis of low birth weight data (notebook)

Poisson and negative binomial regression analysis of fish abundance data (notebook)

- Cross sectional smoothing of NHANES data (notebook)

Survival analysis of NHANES 3 data (notebook)

Basic proportional hazards regression in Statsmodels, R, and Stata (notebook)

Diagnostics for proportional hazards regression models (notebook)

Simulated data example for dependent events (notebook)

Prediction in proportional hazards models (notebook)

- Simulation study using "corr_nearest" (notebook)

Two examples using both R (LME4) and Statsmodels (notebook)

Regression analysis of healthcare spending in Vietnam, using mixed models and GEE. Stata results provided for comparison (notebook)

GEE analysis of longitudinal CD4 counts (notebook)

GEE Poisson model for repeated measures of epileptic seizure counts (notebook)

GEE Gaussian and Poisson models for repeated measures of disease incidence in herds of cattle (notebook, data set)

GEE for discrete ordinal test score data with cluster sampling (notebook)

GEE score test simulation study (notebook)

GEE for repeated measures of outcomes that are proportions (notebook)

GEE analyses of student test score data with nested dependence (notebook)

GEE simulation study for data with nested dependence (notebook)

GEE simulation study for Poisson regression with overdispersion (notebook)

GEE simulation study for regression with nominal data (notebook)

Baseline adjustment and GEE (notebook)

Subset the data by state (notebook)

Drill-down: identify providers receiving high payments (notebook)

Compare provider types by state (notebook)

Associations beween provider type and service type (notebook)

- Survival analysis of NHANES 3 data (notebook)